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PDBsum entry 6mdt
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Pore analysis for: 6mdt calculated with  MOLE 2.0
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PDB id
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6mdt
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.21 |
3.71 |
62.4 |
1.58 |
0.58 |
5.4 |
71 |
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1 |
2 |
3 |
14 |
6 |
2 |
3 |
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NAG 1 K NAG 2 K
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2 |
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1.48 |
1.47 |
203.4 |
-0.89 |
-0.39 |
11.8 |
86 |
7 |
8 |
17 |
15 |
9 |
6 |
0 |
NAG 1 K NAG 2 K
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3 |
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1.38 |
1.49 |
263.2 |
-0.53 |
-0.28 |
10.2 |
84 |
9 |
8 |
19 |
18 |
11 |
7 |
0 |
NAG 1 O NAG 2 O NAG 1 P NAG 2 P BMA 3 P
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4 |
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2.89 |
2.99 |
26.6 |
-0.42 |
-0.33 |
8.9 |
81 |
2 |
1 |
0 |
3 |
0 |
2 |
0 |
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5 |
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1.88 |
1.90 |
51.4 |
-0.51 |
-0.65 |
5.2 |
102 |
1 |
0 |
4 |
3 |
0 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program