PDBsum entry 6mdp Go to PDB code:  Pore analysis for: 6mdp calculated with MOLE 2.0 PDB id 6mdp Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   12 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.25 40.2 1.15 0.28 9.2 79 3 2 1 8 1 0 0   2 1.13 3.06 64.2 -0.41 0.05 16.6 79 4 3 4 5 3 1 0   3 1.39 1.48 66.5 -1.89 -0.35 24.8 81 7 4 4 2 1 1 0   4 1.33 1.54 77.2 1.19 0.31 7.3 81 3 2 3 15 0 0 0   5 1.26 1.26 86.3 0.79 0.21 9.5 84 4 3 4 13 1 0 0   6 1.40 1.83 92.8 -0.35 -0.07 16.2 80 6 5 6 13 3 3 0  ATP 801 D 7 1.15 3.41 113.8 -1.43 -0.41 16.7 82 8 8 6 9 2 3 0  ADP 802 E 8 1.34 1.49 119.6 -1.93 -0.41 25.0 79 16 12 10 8 3 2 0  ATP 802 B 9 1.21 1.68 139.2 -1.39 -0.48 19.6 88 10 12 14 10 2 1 0  ATP 801 F 10 1.22 1.63 135.4 -1.16 -0.25 19.5 86 11 5 6 12 0 2 0  ADP 801 A 11 1.27 1.66 145.2 -0.55 -0.21 14.6 88 8 6 7 12 2 1 0  ADP 801 A 12 1.18 1.27 149.1 -0.41 -0.03 12.6 78 5 6 7 11 3 2 0   13 1.48 1.69 172.4 -1.04 -0.19 21.4 80 16 11 11 21 5 3 0  ATP 802 B ATP 801 D 14 1.26 1.68 172.7 -1.47 -0.39 20.8 85 17 12 12 13 2 2 0  ATP 802 B ATP 801 F 15 1.27 1.62 214.8 -0.97 -0.19 17.4 80 20 12 10 19 6 3 0  ATP 802 D 16 1.32 1.31 213.5 -0.49 -0.13 14.9 84 15 11 11 24 4 4 1  ADP 801 A ATP 802 A 17 1.30 1.67 223.7 -0.68 -0.22 17.6 82 15 13 11 24 3 2 0  ADP 801 A ATP 801 F 18 1.24 1.38 228.6 -1.39 -0.22 20.1 81 21 12 10 16 7 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.