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PDBsum entry 6m32

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Pore analysis for: 6m32 calculated with MOLE 2.0 PDB id
6m32
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.54 4.74 51.2 0.94 0.87 8.1 73 3 0 1 9 6 0 1  BCL 804 A BCL 807 A BCL 808 A BCL 810 A BCL 811 A
BCL 812 A BCL 815 A F26 816 A
2 1.99 2.27 59.9 0.27 0.49 10.8 71 4 1 2 6 7 0 1  BCL 814 A F39 817 A LHG 818 A LMG 819 A
3 1.51 1.52 62.6 1.03 0.77 9.4 76 4 0 1 11 6 0 0  BCL 804 a BCL 805 a BCL 806 a BCL 807 a BCL 808 a
BCL 810 a F26 816 a F39 817 a
4 1.76 1.94 62.7 -0.49 -0.09 11.9 80 4 0 4 5 3 2 0  BCL 815 A
5 1.53 1.52 71.9 0.68 0.56 5.5 75 3 1 4 10 8 0 1  BCL 805 a BCL 814 a F39 817 a LHG 818 a LMG 819 a
6 1.68 1.83 79.2 0.57 0.68 10.3 74 5 0 4 11 9 0 1  BCL 804 a BCL 807 a BCL 808 a BCL 810 a BCL 811 a
BCL 812 a BCL 815 a F26 816 a
7 1.92 2.10 79.9 0.04 0.39 12.8 77 6 3 3 8 6 0 1  BCL 805 A BCL 814 A F39 817 A LHG 818 A LMG 819 A
8 2.03 2.27 83.4 1.01 0.76 10.8 69 3 1 1 13 9 0 1  BCL 806 A BCL 809 A BCL 812 A BCL 814 A F39 817 A
LHG 818 A LMG 819 A
9 2.46 2.61 84.2 0.39 0.55 13.1 71 5 2 3 10 10 0 1  BCL 806 A BCL 809 A BCL 812 A F39 817 A LHG 818 A
LMG 819 A
10 1.37 2.26 91.0 0.11 0.17 12.2 77 6 4 6 15 7 5 0  BCL 372 F BCL 373 F BCL 374 F BCL 375 F BCL 376 F
BCL 377 F
11 1.25 1.25 92.3 0.92 0.38 6.0 80 4 1 5 15 9 0 1  GS0 801 A LHG 818 A LMG 819 A G2O 802 a G2O 803 a
12 2.44 2.60 97.0 0.75 0.69 11.5 72 7 2 2 13 11 0 1  BCL 804 a BCL 806 a BCL 807 a BCL 808 a BCL 809 a
BCL 810 a BCL 812 a F26 816 a F39 817 a LHG 818 a
LMG 819 a
13 1.89 2.37 104.2 0.69 0.65 12.9 74 5 3 2 15 8 0 1  BCL 805 A BCL 806 A BCL 809 A BCL 812 A BCL 814 A
F39 817 A LHG 818 A LMG 819 A
14 1.50 1.53 111.2 1.05 0.70 6.2 72 4 0 6 19 15 0 1  BCL 804 a BCL 805 a BCL 806 a BCL 810 a BCL 811 a
BCL 812 a BCL 815 a F26 816 a F39 817 a
15 1.15 1.21 111.6 0.40 0.30 9.8 76 7 3 6 17 11 0 1  GS0 801 A LHG 818 A LMG 819 A G2O 802 a G2O 803 a
16 1.81 3.91 117.4 -0.44 0.13 10.6 73 5 3 7 9 8 1 1  BCL 804 A BCL 811 A BCL 812 A BCL 813 A BCL 815 A
F26 816 A
17 1.67 2.95 122.7 -1.15 -0.19 14.1 77 7 4 8 6 6 1 0  BCL 804 A BCL 812 A BCL 813 A F26 816 A
18 1.54 1.54 124.5 1.20 0.75 5.4 74 3 0 4 19 13 0 1  BCL 804 a BCL 805 a BCL 806 a BCL 810 a BCL 811 a
BCL 812 a BCL 815 a F26 816 a F39 817 a
19 1.19 1.31 128.8 0.70 0.67 9.0 76 7 1 4 22 19 0 1  GS0 801 A G2O 802 A GS0 801 a G2O 802 a G2O 803 a
LHG 818 a LMG 819 a
20 1.26 1.26 127.6 1.28 0.56 6.1 77 3 1 4 22 12 0 1  GS0 801 A BCL 806 A BCL 809 A BCL 812 A BCL 814 A
F39 817 A LHG 818 A LMG 819 A G2O 802 a G2O 803 a
21 1.26 1.25 131.1 0.59 0.59 8.1 72 4 0 4 22 20 0 0  GS0 801 A G2O 802 A GS0 801 a G2O 802 a G2O 803 a
BCL 805 a F39 817 a LHG 818 a LMG 819 a
22 1.46 2.58 141.9 0.52 0.31 11.5 80 8 5 3 26 12 4 1  BCL 371 E BCL 372 E BCL 373 E BCL 374 E BCL 375 E
BCL 376 E BCL 377 E BCL 372 G BCL 373 G BCL 374 G
BCL 377 G BCL 378 G
23 1.18 1.90 141.0 1.05 0.66 6.5 79 7 1 6 32 15 2 1  BCL 804 A BCL 805 A BCL 806 A BCL 810 A BCL 812 A
F26 816 A BCL 371 E BCL 372 E BCL 373 E BCL 374 E
BCL 375 E BCL 376 E BCL 377 E
24 1.90 2.38 151.8 0.46 0.57 10.9 73 6 2 5 16 16 0 2  BCL 806 a BCL 809 a BCL 811 a BCL 812 a BCL 815 a
F26 816 a F39 817 a LHG 818 a LMG 819 a
25 1.23 1.97 179.1 0.79 0.47 6.8 77 7 1 9 34 15 6 2  BCL 804 A BCL 805 A BCL 806 A BCL 810 A BCL 811 A
BCL 812 A BCL 815 A F26 816 A BCL 373 E BCL 374 E
BCL 375 E BCL 376 E BCL 377 E
26 1.24 1.92 177.3 0.36 0.35 9.8 78 9 5 5 29 13 4 2  BCL 805 A BCL 806 A BCL 809 A BCL 810 A F39 817 A
LHG 818 A LMG 819 A BCL 373 E BCL 374 E BCL 375 E
BCL 376 E BCL 377 E
27 1.19 1.35 183.6 -0.33 -0.04 11.2 79 10 7 15 20 12 6 0  BCL 371 E BCL 372 E BCL 373 E BCL 374 E BCL 375 E
BCL 376 E BCL 377 E
28 1.32 1.92 183.7 -0.59 -0.12 13.5 78 12 10 14 18 11 6 0  BCL 372 E BCL 373 E BCL 374 E BCL 375 E BCL 376 E
BCL 377 E
29 1.13 1.25 199.9 0.67 0.48 9.2 74 8 3 9 30 20 0 2  GS0 801 A BCL 806 A BCL 809 A BCL 811 A BCL 812 A
BCL 814 A BCL 815 A F26 816 A F39 817 A LHG 818 A
LMG 819 A G2O 802 a G2O 803 a
30 1.24 2.07 217.1 0.07 0.17 12.6 77 12 10 10 30 11 7 0  BCL 371 G BCL 372 G BCL 373 G BCL 374 G BCL 375 G
BCL 376 G BCL 377 G

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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