PDBsum entry 6lpy Go to PDB code:  Tunnel analysis for: 6lpy calculated with MOLE 2.0 PDB id 6lpy Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 2.27 22.4 0.16 -0.19 14.4 85 1 2 1 7 1 0 0   2 1.09 1.09 23.1 -0.21 -0.07 12.4 80 3 1 2 6 1 0 0   3 1.72 3.54 15.4 2.94 0.79 0.6 79 0 0 1 13 0 0 0   4 1.70 2.70 17.3 3.17 0.89 0.4 77 0 0 1 13 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.