PDBsum entry 6iiu Go to PDB code:  Tunnel analysis for: 6iiu calculated with MOLE 2.0 PDB id 6iiu Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.89 2.36 17.4 0.18 0.25 15.2 76 1 4 0 5 2 0 0   2 1.85 1.98 19.9 1.32 0.32 4.2 89 1 1 0 5 1 1 0   3 1.20 1.20 19.6 -2.20 -0.54 22.3 71 4 2 0 0 1 3 0   4 1.41 1.42 27.2 -1.06 -0.34 17.9 69 4 2 1 4 3 0 0  GOL 9006 A 5 1.41 1.42 28.9 -0.96 -0.45 12.8 74 2 1 2 3 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.