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PDBsum entry 6id2

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 6id2 calculated with MOLE 2.0 PDB id
6id2
Pores calculated on whole structure Pores calculated excluding ligands

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16 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.33 2.84 33.2 -2.02 -0.65 30.3 92 5 5 4 4 0 0 0  
2 2.51 2.72 34.1 -1.19 -0.46 16.4 94 2 3 3 3 0 0 0  
3 2.07 2.10 38.6 -1.48 -0.76 2.9 100 0 0 9 1 0 1 0  
4 3.16 3.30 43.3 -1.93 -0.46 10.9 80 4 3 7 3 3 0 0  
5 2.72 3.21 45.7 -0.67 -0.27 3.5 84 1 0 8 6 2 1 0  
6 2.73 3.38 50.9 -0.80 -0.31 6.4 86 2 3 9 6 1 1 0  
7 2.42 3.02 51.7 -0.82 -0.27 7.2 90 2 2 12 6 1 1 0  
8 1.18 5.38 53.8 -2.66 -0.72 38.4 86 5 11 3 5 0 0 0  
9 2.14 2.14 69.7 -2.55 -0.69 32.6 86 10 12 9 0 2 0 0  
10 2.06 2.11 75.0 -0.37 -0.28 5.9 88 2 4 9 9 1 1 0  
11 1.67 2.11 205.9 -2.65 -0.68 27.4 83 14 18 18 5 3 1 0  
12 1.26 1.38 223.1 -1.51 -0.38 17.5 82 11 14 20 12 4 2 2  
13 1.27 1.87 206.6 -1.47 -0.47 20.9 86 15 18 15 5 6 1 0  
14 1.95 2.00 217.7 -1.95 -0.54 20.2 86 12 17 22 12 1 2 0  
15 1.81 2.22 211.9 -2.68 -0.70 27.4 84 15 21 19 6 2 1 0  
16 1.36 1.48 230.8 -2.34 -0.61 25.9 84 19 21 19 6 5 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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