spacer
spacer

PDBsum entry 6i2s

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6i2s calculated with MOLE 2.0 PDB id
6i2s
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.39 19.0 -0.28 -0.06 12.8 75 1 1 0 3 1 2 1  
2 1.30 1.32 16.5 -0.72 -0.49 11.2 86 0 2 3 3 1 2 0  
3 1.40 1.40 19.4 -1.79 -0.37 22.2 81 2 2 3 2 2 2 0  
4 1.19 1.20 15.8 0.26 0.00 4.5 86 0 1 3 4 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer