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PDBsum entry 6hv6

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Toxin PDB id
6hv6
Contents
Protein chain
293 a.a.
Ligands
EDO ×6
EPE
Waters ×184

References listed in PDB file
Key reference
Title A cysteine protease-Like domain enhances the cytotoxic effects of the photorhabdus asymbiotica toxin patox.
Authors X.Bogdanovic, S.Schneider, N.Levanova, C.Wirth, C.Trillhaase, M.Steinemann, C.Hunte, K.Aktories, T.Jank.
Ref. J Biol Chem, 2019, 294, 1035-1044. [DOI no: 10.1074/jbc.RA118.005043]
PubMed id 30478175
Abstract
The nematode mutualistic bacterium Photorhabdus asymbiotica produces a large virulence-associated multifunctional protein toxin named PaTox. A glycosyltransferase domain and a deamidase domain of this large toxin function as effectors that specifically target host Rho GTPases and heterotrimeric G proteins, respectively. Modification of these intracellular regulators results in toxicity toward insects and mammalian cells. In this study, we identified a cysteine protease-like domain spanning PaTox residues 1844-2114 (PaToxP), upstream of these two effector domains and characterized by three conserved amino acid residues (Cys-1865, His-1955, and Asp-1975). We determined the crystal structure of the PaToxP C1865A variant by native single-wavelength anomalous diffraction of sulfur atoms (sulfur-SAD). At 2.0 Å resolution, this structure revealed a catalytic site typical for papain-like cysteine proteases, comprising a catalytic triad, oxyanion hole, and typical secondary structural elements. The PaToxP structure had highest similarity to that of the AvrPphB protease from Pseudomonas syringae classified as a C58-protease. Furthermore, we observed that PaToxP shares structural homology also with non-C58-cysteine proteases, deubiquitinases, and deamidases. Upon delivery into insect larvae, PaToxP alone without full-length PaTox had no toxic effects. Yet, PaToxP expression in mammalian cells was toxic and enhanced the apoptotic phenotype induced by PaTox in HeLa cells. We propose that PaToxP is a C58-like cysteine protease module that is essential for full PaTox activity.
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