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PDBsum entry 6hv5

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Pore analysis for: 6hv5 calculated with MOLE 2.0 PDB id
6hv5
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.40 1.62 56.7 -2.32 -0.60 26.3 85 8 7 6 3 1 1 0  
2 1.74 1.91 59.8 -1.40 -0.23 25.5 78 10 7 0 6 2 1 0  
3 1.50 1.60 81.0 -2.58 -0.59 30.6 83 12 13 6 4 1 1 0  
4 1.88 2.92 105.5 -2.30 -0.38 26.9 78 15 7 6 3 8 1 0  
5 1.23 1.29 107.8 -1.67 -0.23 20.1 75 12 6 5 8 7 2 0  
6 1.23 1.24 117.3 -1.87 -0.34 24.1 77 18 7 6 7 6 1 0  
7 1.42 1.48 126.4 -1.70 -0.32 21.8 80 11 7 9 7 8 1 0  
8 1.84 3.47 126.3 -2.56 -0.44 28.6 78 18 11 5 3 7 2 0  
9 1.66 1.73 129.9 -2.31 -0.46 30.0 78 20 9 6 4 6 2 0  
10 1.20 1.52 136.1 -1.35 -0.28 19.8 79 14 7 8 11 7 1 0  
11 1.43 1.46 133.8 -2.02 -0.42 27.2 82 18 12 7 6 5 0 0  
12 1.15 1.51 176.3 -1.88 -0.29 24.3 78 18 11 7 10 8 1 0  
13 2.51 3.66 195.5 -2.24 -0.45 21.1 81 15 5 16 6 11 1 0  
14 1.78 2.84 200.2 -2.50 -0.42 27.6 82 26 8 12 4 10 1 0  
15 2.04 2.05 200.5 -2.36 -0.42 24.3 81 21 7 14 5 11 2 0  
16 1.32 1.29 204.2 -1.95 -0.43 19.1 81 18 5 15 10 8 1 0  
17 1.42 1.41 209.1 -2.00 -0.38 23.4 83 20 8 14 7 10 1 0  
18 1.23 1.56 209.2 -2.09 -0.40 22.2 81 24 7 13 9 8 2 0  
19 2.05 2.12 206.5 -2.47 -0.50 23.1 80 21 8 13 4 11 1 0  
20 1.48 1.57 216.7 -1.93 -0.41 18.6 82 15 10 17 9 11 0 0  GQH 301 K
21 1.28 1.51 215.1 -2.17 -0.45 21.3 80 24 8 12 8 8 1 0  
22 1.66 1.88 215.2 -2.27 -0.47 23.5 79 21 9 13 7 9 2 0  
23 1.87 2.94 218.1 -2.50 -0.52 24.4 82 23 10 14 5 10 0 0  
24 1.18 1.60 223.8 -2.01 -0.44 21.7 80 24 9 13 11 6 2 0  
25 1.50 1.82 236.3 -2.03 -0.44 21.5 81 21 14 15 10 9 1 0  GQH 301 K
26 1.99 2.18 223.1 -2.63 -0.49 27.5 82 29 12 12 4 10 1 0  
27 1.20 1.44 227.6 -2.10 -0.44 19.8 81 21 13 14 7 11 0 0  GQH 301 K
28 1.89 3.35 229.0 -2.71 -0.54 26.3 81 29 13 11 3 10 0 0  
29 1.69 1.57 237.7 -2.49 -0.52 26.4 81 29 14 12 6 8 1 0  
30 1.28 1.20 263.9 -2.60 -0.42 31.2 80 30 22 10 7 9 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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