spacer
spacer

PDBsum entry 6huv

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6huv calculated with MOLE 2.0 PDB id
6huv
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.58 1.90 17.4 -1.93 -0.50 17.3 86 1 3 4 1 1 1 0  
2 1.17 1.36 20.6 -1.55 -0.41 11.2 81 2 2 2 1 1 1 0  
3 1.56 2.04 17.2 -1.85 -0.48 15.2 83 1 3 3 1 1 1 0  
4 1.20 1.23 18.8 -0.79 -0.02 16.9 69 1 1 1 3 2 0 0  
5 1.19 1.45 19.5 -0.36 0.20 12.2 69 1 1 1 3 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer