PDBsum entry 6hu1

Pore analysis for: 6hu1 calculated with

MOLE 2.0

PDB id

6hu1

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

7 pores, coloured by radius

13 pores, coloured by radius

13 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.94

2.27

35.4

-1.94

-0.63

15.4

74

2

4

4

2

2

2

0

2

1.60

2.62

36.8

-2.48

-0.49

34.0

77

5

6

1

1

2

1

0

3

1.14

1.53

48.3

-0.98

-0.50

6.0

88

1

1

5

3

1

1

0

GOL 512 A

4

2.32

2.28

58.2

-2.09

-0.33

26.8

77

7

4

3

3

2

3

0

5

2.31

2.50

61.7

-2.16

-0.38

27.2

81

7

5

5

1

3

1

0

6

1.73

3.50

79.0

-1.42

-0.30

22.2

77

5

7

2

7

3

1

0

7

1.19

1.54

90.4

-1.67

-0.46

23.0

81

5

9

6

5

4

0

0

GOL 512 A

8

1.60

2.59

93.2

-2.00

-0.46

26.1

79

6

9

3

5

3

2

0

9

1.20

1.53

106.0

-2.03

-0.53

25.4

82

5

11

7

3

4

1

0

GOL 512 A

10

1.18

1.39

111.6

-1.67

-0.41

21.1

79

6

10

7

6

4

1

0

GOL 512 A

11

1.55

3.47

116.1

-2.05

-0.65

23.8

81

4

10

4

3

3

2

0

GOL 512 A

12

1.38

1.48

116.6

-1.62

-0.50

20.1

80

4

9

4

5

4

1

0

GOL 512 A

13

1.56

3.38

121.8

-1.64

-0.51

19.4

79

5

9

4

6

3

2

0

GOL 512 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.