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PDBsum entry 6ht9

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6ht9 calculated with MOLE 2.0 PDB id
6ht9
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.48 26.1 -0.85 -0.25 6.3 73 0 1 4 0 5 1 1  
2 1.41 1.42 33.0 -1.26 -0.16 15.6 77 3 3 2 0 4 1 0  
3 1.35 1.35 16.0 -0.51 -0.49 13.7 90 1 2 0 2 0 0 0  
4 1.29 2.26 24.1 -1.58 -0.57 21.4 76 2 2 1 1 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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