 |
PDBsum entry 6fqc
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 6fqc calculated with  MOLE 2.0
|
PDB id
|
|
|
|
6fqc
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Pores calculated on whole structure |
|
Pores calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
6 pores,
coloured by radius |
|
5 pores,
coloured by radius
|
5 pores,
coloured as in
list below
|
|
|
|
|
|
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.22 |
1.23 |
26.8 |
0.46 |
-0.15 |
8.9 |
86 |
|
1 |
3 |
3 |
8 |
0 |
0 |
0 |
|
CL 505 A
|
 |
|
2 |
 |
1.70 |
2.02 |
34.6 |
-1.43 |
-0.11 |
12.4 |
69 |
5 |
0 |
3 |
3 |
3 |
2 |
0 |
GOL 501 B NA 510 B
|
|
3 |
 |
1.67 |
2.06 |
60.3 |
-1.51 |
-0.08 |
17.4 |
72 |
8 |
3 |
2 |
4 |
4 |
3 |
0 |
NA 508 A
|
|
4 |
 |
1.14 |
1.14 |
83.8 |
-0.98 |
-0.18 |
19.0 |
84 |
9 |
7 |
4 |
8 |
1 |
3 |
0 |
CL 505 A CL 506 B
|
 |
5 |
 |
1.89 |
2.55 |
96.5 |
-2.17 |
-0.30 |
29.2 |
81 |
10 |
8 |
2 |
4 |
3 |
1 |
0 |
CL 506 B
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program