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PDBsum entry 6fpy

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6fpy calculated with MOLE 2.0 PDB id
6fpy
Pores calculated on whole structure Pores calculated excluding ligands

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9 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.88 2.12 29.5 -1.57 -0.55 19.9 89 2 2 5 5 1 0 0  
2 2.57 3.08 31.1 -1.57 -0.52 21.9 85 5 4 4 5 0 1 0  
3 2.44 2.55 31.7 -1.81 -0.65 18.4 89 3 3 4 4 1 0 0  
4 2.35 3.68 32.9 -1.97 -0.53 19.5 86 5 2 4 3 0 1 0  
5 2.39 3.64 55.0 -2.46 -0.54 25.0 84 9 4 6 3 0 0 0  
6 2.36 3.73 58.5 -2.63 -0.60 23.6 83 9 3 7 3 0 1 0  
7 2.54 2.54 60.8 -2.32 -0.57 22.8 84 7 4 5 3 1 1 0  
8 2.42 3.74 66.6 -1.79 -0.42 23.5 82 9 5 5 8 0 1 0  
9 2.42 3.53 67.8 -1.79 -0.40 20.8 81 8 4 5 6 1 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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