spacer
spacer

PDBsum entry 6fmz

Go to PDB code: 
Top Page protein ligands pores links
Pore analysis for: 6fmz calculated with MOLE 2.0 PDB id
6fmz
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.30 3.25 30.1 -1.52 0.05 17.8 73 4 2 2 3 2 1 0  
2 1.99 2.29 33.2 -0.46 -0.01 8.4 74 5 0 2 3 3 1 1  FAD 601 A DVQ 602 A
3 1.36 2.47 92.0 -1.11 -0.40 14.4 77 5 4 4 3 3 2 1  FAD 601 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer