 |
PDBsum entry 6fbw
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 6fbw calculated with MOLE 2.0
|
PDB id
|
|
|
|
6fbw
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
5 tunnels,
coloured by tunnel radius |
 |
8 tunnels,
coloured by
tunnel radius
|
8 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
3.28 |
5.07 |
18.8 |
-1.65 |
-0.45 |
23.0 |
85 |
 |
0 |
4 |
1 |
3 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
2.46 |
4.19 |
19.2 |
-2.03 |
-0.75 |
26.3 |
83 |
0 |
5 |
1 |
2 |
1 |
0 |
0 |
|
 |
3 |
 |
3.32 |
5.12 |
21.9 |
-1.62 |
-0.28 |
26.2 |
82 |
2 |
3 |
0 |
3 |
2 |
0 |
0 |
|
 |
4 |
 |
1.25 |
1.25 |
15.4 |
1.07 |
0.50 |
7.8 |
78 |
1 |
1 |
1 |
5 |
1 |
1 |
0 |
D4K 101 D
|
 |
5 |
 |
1.23 |
1.23 |
20.4 |
1.17 |
0.62 |
11.2 |
74 |
2 |
1 |
1 |
4 |
1 |
0 |
1 |
D4K 101 D
|
 |
6 |
 |
1.23 |
1.23 |
34.2 |
-1.22 |
-0.17 |
18.9 |
79 |
5 |
1 |
2 |
5 |
2 |
1 |
0 |
SEP 5 D D4K 101 D
|
 |
7 |
 |
1.25 |
1.25 |
15.1 |
1.03 |
0.55 |
7.1 |
75 |
1 |
1 |
1 |
5 |
1 |
1 |
1 |
D4K 101 B
|
 |
8 |
 |
1.25 |
1.50 |
16.3 |
-1.81 |
0.04 |
27.4 |
77 |
3 |
1 |
2 |
3 |
2 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |