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PDBsum entry 6exf

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6exf calculated with MOLE 2.0 PDB id
6exf
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.60 1.61 29.2 -2.59 -0.92 20.3 86 2 5 6 0 1 0 0  
2 1.29 1.61 29.1 -0.51 -0.12 8.9 81 1 4 3 3 1 2 0  
3 1.20 1.52 49.7 -1.40 -0.27 17.9 86 6 3 6 5 2 1 0  FE 401 A LYS 402 A LYS 403 A
4 1.13 1.49 29.6 -0.18 0.30 10.7 84 3 1 3 5 3 1 0  FE 401 B LYS 402 B
5 1.02 1.39 42.3 -0.92 -0.05 17.8 81 6 2 3 5 3 1 0  FE 401 D LYS 402 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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