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PDBsum entry 6epa

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Signaling protein PDB id
6epa
Contents
Protein chain
183 a.a.
Ligands
BNQ
PG0
Metals
_NA
_CA ×3
Waters ×165

References listed in PDB file
Key reference
Title Deciphering the inhibition of the neuronal calcium sensor 1 and the guanine exchange factor ric8a with a small phenothiazine molecule for the rational generation of therapeutic synapse function regulators.
Authors C.Roca, L.Martinez-González, M.Daniel-Mozo, J.Sastre, L.Infantes, A.Mansilla, A.Chaves-Sanjuan, J.M.González-Rubio, C.Gil, F.J.Cañada, A.Martinez, M.J.Sanchez-Barrena, N.E.Campillo.
Ref. J Med Chem, 2018, 61, 5910-5921. [DOI no: 10.1021/acs.jmedchem.8b00088]
PubMed id 29966094
Abstract
Protein-protein interactions (PPIs) are known to play an essential role between the neuronal calcium sensor 1 (NCS-1) and the guanine exchange factor Ric8a to regulate synapse function, emerging as a druggable interface for synaptopathies such as the fragile X syndrome (FXS). Recently, the phenothiazine FD44 has been identified as an inhibitor of this PPI, decreasing the abnormally high synapse number and enhancing associative learning in a FXS animal model. Here, we have integrated advanced experimental and computational studies to obtain important structural insights into Drosophila NCS-1/FD44 recognition to understand the basis of its affinity and specificity and generate improved PPI regulators. This has allowed the identification of a new small drug-like molecule, IGS-1.76, which efficiently inhibits the human NCS-1/Ric8a complex with improved binding potency. The crystal structure of the Drosophila NCS-1/IGS-1.76 complex demonstrates that the new inhibitor, although chemically different from FD44, shares the same mechanism of action and constitutes a new hit candidate for FXS.
PROCHECK
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