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PDBsum entry 6ebc

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6ebc calculated with MOLE 2.0 PDB id
6ebc
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.68 1.70 32.0 -1.32 -0.38 20.6 81 4 3 2 4 1 2 0  
2 1.69 1.70 37.6 -1.34 -0.48 17.2 84 4 4 6 3 1 2 0  
3 2.28 3.70 45.6 -1.45 -0.39 25.5 83 4 4 1 2 2 0 0  
4 1.93 2.52 48.6 -1.58 -0.48 22.3 84 5 3 4 2 1 0 0  
5 1.70 3.25 51.8 -2.86 -0.77 33.8 82 3 6 3 3 0 0 0  
6 2.28 3.81 74.0 -2.23 -0.41 35.0 84 5 7 1 4 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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