 |
PDBsum entry 6e5b
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 6e5b calculated with MOLE 2.0
|
PDB id
|
|
|
|
6e5b
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
30 pores,
coloured by radius |
 |
30 pores,
coloured by radius
|
30 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.18 |
2.50 |
25.9 |
-0.35 |
-0.05 |
13.9 |
84 |
 |
4 |
3 |
2 |
3 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.56 |
2.52 |
44.3 |
-0.72 |
-0.06 |
11.7 |
75 |
6 |
2 |
4 |
1 |
6 |
0 |
0 |
|
 |
3 |
 |
1.95 |
2.01 |
83.7 |
-2.28 |
-0.54 |
19.8 |
79 |
10 |
4 |
6 |
1 |
5 |
3 |
0 |
|
 |
4 |
 |
1.39 |
1.98 |
97.1 |
-2.51 |
-0.31 |
23.6 |
81 |
10 |
7 |
8 |
4 |
5 |
0 |
0 |
|
 |
5 |
 |
1.40 |
3.37 |
114.3 |
-2.38 |
-0.24 |
25.3 |
80 |
14 |
9 |
5 |
4 |
8 |
1 |
0 |
|
 |
6 |
 |
1.21 |
2.51 |
117.1 |
-2.15 |
-0.27 |
25.4 |
83 |
15 |
6 |
9 |
6 |
5 |
0 |
0 |
|
 |
7 |
 |
1.37 |
1.61 |
118.7 |
-2.17 |
-0.16 |
23.8 |
77 |
18 |
6 |
7 |
4 |
10 |
0 |
0 |
|
 |
8 |
 |
1.25 |
1.39 |
122.4 |
-1.20 |
-0.21 |
12.7 |
79 |
11 |
6 |
10 |
9 |
12 |
1 |
1 |
HUJ 901 K HUJ 901 Y
|
 |
9 |
 |
1.63 |
1.76 |
130.9 |
-2.04 |
-0.12 |
22.6 |
77 |
20 |
8 |
6 |
5 |
11 |
1 |
0 |
|
 |
10 |
 |
1.43 |
1.79 |
139.6 |
-1.69 |
-0.30 |
18.1 |
81 |
12 |
8 |
11 |
7 |
8 |
1 |
1 |
HUJ 901 K
|
 |
11 |
 |
1.52 |
1.67 |
145.3 |
-1.41 |
-0.23 |
16.7 |
82 |
12 |
10 |
9 |
9 |
8 |
1 |
1 |
HUJ 901 K
|
 |
12 |
 |
1.16 |
1.37 |
150.9 |
-1.80 |
-0.14 |
19.6 |
77 |
15 |
7 |
10 |
9 |
14 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
13 |
 |
1.21 |
2.77 |
150.7 |
-1.82 |
-0.13 |
23.2 |
79 |
25 |
7 |
7 |
7 |
11 |
1 |
0 |
|
 |
14 |
 |
1.16 |
1.30 |
162.7 |
-1.63 |
-0.09 |
18.5 |
80 |
16 |
9 |
8 |
10 |
14 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
15 |
 |
1.23 |
1.37 |
166.3 |
-1.76 |
-0.11 |
20.3 |
78 |
20 |
9 |
7 |
8 |
16 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
16 |
 |
1.38 |
1.52 |
172.6 |
-2.59 |
-0.31 |
27.9 |
79 |
18 |
10 |
14 |
5 |
12 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
17 |
 |
1.99 |
2.15 |
179.2 |
-2.09 |
-0.40 |
25.5 |
75 |
17 |
8 |
4 |
2 |
6 |
3 |
0 |
|
 |
18 |
 |
1.67 |
1.85 |
182.6 |
-2.21 |
-0.40 |
20.3 |
79 |
16 |
11 |
15 |
6 |
14 |
4 |
0 |
|
 |
19 |
 |
1.40 |
1.78 |
178.3 |
-2.36 |
-0.25 |
26.4 |
80 |
18 |
12 |
12 |
7 |
12 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
20 |
 |
1.43 |
1.52 |
189.5 |
-2.46 |
-0.48 |
22.9 |
78 |
19 |
11 |
18 |
4 |
13 |
4 |
0 |
|
 |
21 |
 |
1.47 |
3.54 |
186.6 |
-2.48 |
-0.27 |
28.2 |
79 |
20 |
12 |
11 |
6 |
14 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
22 |
 |
1.64 |
3.31 |
192.2 |
-2.24 |
-0.21 |
26.6 |
79 |
20 |
14 |
9 |
8 |
14 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
23 |
 |
1.23 |
1.87 |
191.6 |
-2.41 |
-0.34 |
25.3 |
81 |
19 |
9 |
18 |
7 |
11 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
24 |
 |
1.48 |
2.61 |
192.7 |
-2.15 |
-0.26 |
23.6 |
77 |
18 |
11 |
14 |
6 |
16 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
25 |
 |
1.62 |
3.22 |
197.3 |
-2.17 |
-0.26 |
23.8 |
81 |
18 |
11 |
16 |
9 |
11 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
26 |
 |
1.34 |
1.48 |
200.0 |
-2.25 |
-0.17 |
27.2 |
77 |
25 |
11 |
12 |
8 |
17 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
27 |
 |
1.60 |
1.97 |
198.3 |
-1.97 |
-0.20 |
22.6 |
78 |
18 |
13 |
12 |
8 |
16 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
28 |
 |
1.41 |
1.60 |
205.7 |
-2.05 |
-0.12 |
25.6 |
78 |
25 |
13 |
10 |
10 |
17 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
29 |
 |
1.44 |
2.31 |
215.4 |
-1.80 |
-0.20 |
23.4 |
79 |
24 |
12 |
14 |
10 |
15 |
2 |
0 |
HUJ 901 K HUJ 901 Y
|
 |
30 |
 |
1.16 |
1.58 |
236.5 |
-1.92 |
-0.19 |
25.0 |
80 |
27 |
14 |
10 |
11 |
15 |
3 |
0 |
HUJ 901 Y
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |