PDBsum entry 6duq Go to PDB code:  Pore analysis for: 6duq calculated with MOLE 2.0 PDB id 6duq Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   22 pores, coloured by radius 24 pores, coloured by radius 24 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.26 2.26 29.2 -1.06 -0.35 7.8 81 0 2 4 4 2 1 0  U 6 Z 2 1.37 1.75 30.1 -1.86 -0.33 30.5 73 5 4 0 2 2 0 0  ADP 1000 H U 6 Z 3 1.43 1.73 30.7 -1.76 -0.26 30.2 73 5 4 0 2 2 0 0  ADP 1000 J U 6 Z 4 1.69 1.69 39.2 -0.88 -0.33 8.5 81 0 2 4 4 2 1 0  U 6 Z 5 1.57 5.21 44.9 -2.59 -0.55 31.9 79 5 4 3 2 1 1 0   6 1.56 2.29 61.0 -1.18 -0.51 18.5 88 5 4 4 4 0 0 0  U 1 Y 7 1.33 2.06 68.6 -1.40 -0.41 19.7 82 8 6 3 6 1 1 0  ADP 1000 D MG 1001 D BEF 1002 D U 1 Y 8 1.56 1.66 78.6 -0.29 -0.45 7.9 90 2 2 4 6 0 1 0  U 1 Y 9 2.42 3.32 97.3 -1.30 -0.44 14.3 83 7 6 8 8 2 3 0   10 2.16 2.15 110.0 -1.59 -0.66 16.7 82 5 7 6 6 2 1 0   11 1.37 2.47 122.2 -1.53 -0.25 18.4 77 6 5 5 7 4 2 0   12 1.88 2.29 127.7 -1.63 -0.59 18.8 85 8 11 11 8 2 1 0   13 3.78 5.55 141.5 -1.68 -0.47 14.9 81 6 7 8 8 3 2 0   14 2.18 2.18 148.5 -1.37 -0.45 19.9 81 11 9 1 6 2 3 0  U 1 Y U 2 Y U 3 Y U 4 Y U 5 Y U 6 Y 15 1.76 2.20 165.0 -1.45 -0.39 15.5 81 8 9 11 11 4 1 0   16 1.50 3.69 187.9 -0.99 -0.36 18.1 82 11 8 3 11 3 3 0  U 1 Y U 2 Y U 3 Y U 4 Y U 5 Y U 6 Y 17 1.22 1.83 198.2 -0.95 -0.15 19.1 78 11 11 3 15 7 4 0   18 1.52 3.75 215.7 -1.20 -0.22 19.8 79 12 10 4 13 5 6 0   19 1.22 1.81 224.6 -1.22 -0.44 16.4 82 11 13 13 18 4 1 0   20 1.28 2.31 225.7 -1.64 -0.46 21.0 79 12 12 4 10 4 5 0   21 1.40 2.35 247.5 -1.43 -0.29 18.7 77 12 12 8 15 6 4 0   22 1.18 1.52 272.2 -1.21 -0.30 16.5 80 17 15 16 19 6 5 0   23 1.53 3.81 300.8 -1.32 -0.35 18.1 80 18 15 11 15 8 7 0   24 1.52 2.60 369.5 -1.29 -0.42 16.4 80 17 17 14 19 7 6 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.