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PDBsum entry 6dts

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 6dts calculated with MOLE 2.0 PDB id
6dts
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.54 2.02 15.5 -0.46 0.47 7.5 74 0 2 2 2 3 0 0  GLC 2 D GLC 3 D GLC 4 D
2 1.53 1.93 20.0 -0.48 0.34 10.7 74 1 2 3 2 4 0 0  GLC 2 D GLC 3 D GLC 4 D
3 1.59 2.07 22.3 -1.19 0.24 18.9 68 1 4 1 2 6 0 0  GLC 1 D GLC 2 D
4 1.52 2.04 15.8 -0.35 0.46 8.1 74 0 2 2 2 3 0 0  GLC 2 C GLC 3 C GLC 4 C
5 1.57 2.05 19.0 -0.73 0.43 13.7 69 0 4 1 2 5 0 0  GLC 1 C GLC 2 C
6 1.51 1.96 20.9 -0.49 0.26 11.7 73 1 2 3 3 4 0 0  GLC 2 C GLC 3 C GLC 4 C
7 1.37 1.37 20.4 0.80 0.03 6.2 78 1 1 1 4 2 0 0  
8 1.39 1.39 20.5 0.69 -0.01 6.7 72 1 1 0 5 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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