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PDBsum entry 6d6t
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Pore analysis for: 6d6t calculated with  MOLE 2.0
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PDB id
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6d6t
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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10 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.66 |
1.79 |
56.3 |
-1.82 |
-0.44 |
25.2 |
83 |
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9 |
5 |
3 |
3 |
2 |
0 |
0 |
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MAN 7 G
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2 |
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1.51 |
1.52 |
57.7 |
-2.35 |
-0.41 |
28.8 |
87 |
10 |
4 |
5 |
1 |
2 |
0 |
0 |
FYP 406 D MAN 7 G
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3 |
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1.88 |
1.91 |
63.2 |
-2.28 |
-0.46 |
30.1 |
84 |
8 |
6 |
4 |
3 |
2 |
0 |
0 |
MAN 7 G
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4 |
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1.29 |
3.76 |
71.3 |
-0.06 |
0.21 |
14.6 |
76 |
2 |
2 |
2 |
8 |
4 |
0 |
0 |
Y01 409 A Y01 410 B Y01 411 B
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5 |
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1.37 |
1.38 |
102.3 |
-0.75 |
-0.10 |
16.6 |
88 |
10 |
5 |
6 |
9 |
5 |
0 |
0 |
FYP 406 D
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6 |
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1.17 |
1.40 |
113.1 |
-1.23 |
-0.10 |
16.1 |
86 |
10 |
8 |
11 |
8 |
8 |
1 |
0 |
FYP 406 D
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7 |
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1.01 |
1.78 |
168.5 |
-1.48 |
-0.49 |
16.8 |
84 |
10 |
7 |
9 |
6 |
3 |
1 |
0 |
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8 |
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1.39 |
1.40 |
175.6 |
-1.01 |
-0.36 |
14.8 |
86 |
10 |
6 |
11 |
9 |
5 |
1 |
0 |
FYP 406 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program