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PDBsum entry 6d4c
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Tunnel analysis for: 6d4c calculated with  MOLE 2.0
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PDB id
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6d4c
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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3 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.00 |
2.48 |
27.2 |
-0.43 |
-0.16 |
10.1 |
88 |
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2 |
0 |
3 |
3 |
0 |
2 |
0 |
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NAD 501 B AZI 502 B
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2 |
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2.19 |
2.19 |
27.6 |
-0.57 |
-0.16 |
12.2 |
89 |
3 |
0 |
4 |
3 |
0 |
1 |
0 |
NAD 501 B AZI 502 B
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3 |
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2.19 |
2.55 |
29.1 |
-0.05 |
-0.07 |
5.8 |
89 |
1 |
1 |
2 |
5 |
2 |
1 |
0 |
NAD 501 B AZI 502 B CL 503 B
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4 |
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1.74 |
1.91 |
32.9 |
-0.52 |
-0.25 |
9.3 |
85 |
3 |
1 |
3 |
3 |
1 |
1 |
0 |
NAD 501 B AZI 502 B
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5 |
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1.12 |
1.12 |
19.2 |
1.75 |
0.37 |
4.0 |
93 |
1 |
0 |
0 |
8 |
0 |
0 |
0 |
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6 |
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1.56 |
1.56 |
25.1 |
-0.20 |
-0.12 |
9.4 |
90 |
3 |
0 |
3 |
3 |
0 |
1 |
0 |
NAD 501 A AZI 502 A
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7 |
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1.56 |
1.56 |
32.6 |
-0.14 |
-0.08 |
6.4 |
88 |
1 |
1 |
2 |
4 |
2 |
1 |
0 |
NAD 501 A AZI 502 A CL 503 A
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8 |
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1.70 |
2.24 |
16.4 |
-1.47 |
-0.07 |
21.2 |
70 |
3 |
2 |
1 |
1 |
2 |
2 |
0 |
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9 |
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1.70 |
2.29 |
16.6 |
-1.49 |
-0.07 |
22.0 |
71 |
3 |
2 |
1 |
1 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program