PDBsum entry 6cod Go to PDB code:  Tunnel analysis for: 6cod calculated with MOLE 2.0 PDB id 6cod Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.33 3.04 23.8 2.08 0.82 1.4 77 1 0 3 8 3 0 1  CL 303 A HBX 304 A 2 1.19 1.19 29.9 0.38 -0.04 6.3 74 1 1 1 6 3 0 0   3 1.35 1.44 15.4 -1.70 -0.59 23.6 83 3 2 0 1 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.