PDBsum entry 6cjs Go to PDB code:  Tunnel analysis for: 6cjs calculated with MOLE 2.0 PDB id 6cjs Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.39 18.1 -0.92 -0.25 12.2 88 1 2 2 5 1 0 0  2GJ 301 A 2 1.35 1.35 18.7 -0.98 -0.33 14.4 88 1 2 2 5 1 0 0  2GJ 301 A 3 1.53 2.75 16.9 1.01 0.65 13.4 59 1 0 0 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.