PDBsum entry 6cii Go to PDB code:  Tunnel analysis for: 6cii calculated with MOLE 2.0 PDB id 6cii Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   1 tunnel, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.45 1.45 15.9 2.77 0.74 0.5 78 0 0 0 10 2 0 0   2 1.65 2.71 16.4 2.72 0.76 0.6 79 0 0 1 10 2 0 0   3 1.29 3.00 23.4 2.19 0.65 0.9 82 0 0 2 9 3 0 0  HEM 201 A 4 1.30 2.94 25.0 2.39 0.71 0.8 82 0 0 2 9 3 0 0  HEM 201 A 5 1.29 2.93 28.8 0.82 0.56 8.9 78 3 0 2 8 3 0 0  HEM 201 A CYN 202 A 6 1.31 2.95 30.3 0.95 0.59 9.0 78 3 0 2 8 3 0 0  HEM 201 A CYN 202 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.