PDBsum entry 6cdk Go to PDB code:  Tunnel analysis for: 6cdk calculated with MOLE 2.0 PDB id 6cdk Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.42 18.9 -0.27 -0.20 10.8 66 3 1 0 4 1 2 0   2 1.14 1.42 19.9 0.37 -0.10 4.4 68 1 0 1 3 1 2 0   3 1.21 1.21 38.5 -0.16 -0.41 4.6 77 1 1 5 1 0 1 6  CLF 503 C 4 1.33 1.33 24.9 -0.87 -0.18 14.2 76 3 2 2 3 4 1 0   5 1.19 1.20 15.8 0.50 -0.04 7.0 76 0 1 1 3 3 0 0   6 1.20 1.20 16.2 0.54 -0.01 7.1 76 0 1 1 3 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.