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PDBsum entry 6cb0

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Top Page protein Protein-protein interface(s) tunnels links
Tunnel analysis for: 6cb0 calculated with MOLE 2.0 PDB id
6cb0
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.35 3.16 20.4 -0.03 -0.19 9.7 71 0 2 2 5 1 1 0  
2 1.23 3.12 22.6 -0.11 -0.11 8.6 72 0 1 1 4 1 1 0  
3 1.25 1.98 22.9 1.57 0.66 1.7 58 0 0 0 8 2 0 0  
4 1.16 2.61 22.5 1.00 0.38 6.4 81 1 1 1 6 1 0 0  
5 1.18 2.54 24.2 0.76 0.35 8.6 77 2 0 0 6 1 1 0  
6 1.27 1.41 20.4 0.22 0.02 8.0 78 2 1 0 4 2 0 0  
7 1.25 1.33 21.3 -0.33 -0.06 16.4 83 3 2 0 3 1 0 0  
8 1.37 1.61 15.9 -0.80 -0.10 23.4 77 3 2 0 3 1 0 0  
9 1.25 1.31 15.5 -1.20 -0.36 21.0 84 1 1 1 0 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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