PDBsum entry 6c9d Go to PDB code:  Tunnel analysis for: 6c9d calculated with MOLE 2.0 PDB id 6c9d Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.04 1.28 33.2 -0.79 -0.41 11.2 82 3 3 4 3 3 0 0   2 1.03 1.28 35.3 -0.03 -0.14 7.1 79 2 1 2 4 3 1 0   3 1.08 1.28 50.7 -0.94 -0.41 15.8 83 5 4 3 6 3 0 0   4 1.06 1.26 52.7 -1.16 -0.44 16.7 82 4 5 4 5 3 1 0   5 1.91 3.20 22.2 -0.67 -0.27 11.2 80 1 3 2 2 2 1 0   6 1.11 1.18 35.8 -0.66 -0.45 9.0 88 1 2 5 3 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.