PDBsum entry 6c6h

Tunnel analysis for: 6c6h calculated with

MOLE 2.0

PDB id

6c6h

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

0 tunnels, coloured by tunnel radius

8 tunnels, coloured by tunnel radius

8 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.68

1.68

18.7

0.89

0.35

1.3

79

0

0

2

7

2

0

1

ELG 303 A PLM 304 A

2

1.56

2.13

26.6

0.37

0.42

3.4

78

1

0

2

7

3

0

1

ELG 303 A PLM 304 A

3

1.25

2.29

28.1

1.59

0.61

2.0

71

1

0

3

4

4

0

1

PLM 304 A

4

1.67

1.67

33.4

0.96

0.50

6.6

72

0

2

2

10

4

1

1

ELG 303 A PLM 304 A

5

1.27

2.30

34.7

1.13

0.68

3.4

71

2

0

3

4

5

0

1

PLM 304 A

6

1.56

2.22

41.3

0.65

0.51

6.7

71

1

2

2

10

5

1

1

ELG 303 A PLM 304 A

7

1.39

2.01

42.0

1.87

0.96

2.4

73

0

1

3

15

6

0

1

ELG 303 A PLM 304 A

8

1.37

2.08

49.9

1.61

0.94

3.2

73

1

1

3

15

7

0

1

ELG 303 A PLM 304 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.