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PDBsum entry 6blk

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 6blk calculated with MOLE 2.0 PDB id
6blk
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.59 1.67 26.8 -1.67 -0.68 13.1 85 2 1 1 3 0 2 0  
2 1.74 1.92 33.5 -1.33 -0.57 12.4 84 3 2 3 1 1 2 0  ATP 501 D MG 502 D
3 1.49 1.61 35.9 -1.47 -0.24 23.2 75 6 4 0 4 2 1 0  
4 1.72 2.61 36.0 -1.20 -0.38 14.3 82 4 2 4 3 1 2 0  ATP 501 D MG 502 D
5 2.25 2.91 37.3 -2.89 -0.70 31.2 86 3 4 3 3 0 0 0  
6 1.45 1.61 41.1 -1.79 -0.62 15.9 87 4 1 3 5 0 0 0  
7 1.63 1.63 41.8 -1.06 -0.29 16.0 79 6 3 3 7 2 1 0  ATP 501 D MG 502 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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