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PDBsum entry 6bkt

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Viral protein PDB id
6bkt
Contents
Protein chains
317 a.a.
173 a.a.
Ligands
NAG-NAG ×4
NAG-GAL-SIA
NAG ×3
PEG
SO4 ×4
1PE ×2
Waters ×474

References listed in PDB file
Key reference
Title A complex epistatic network limits the mutational reversibility in the influenza hemagglutinin receptor-Binding site.
Authors N.C.Wu, A.J.Thompson, J.Xie, C.W.Lin, C.M.Nycholat, X.Zhu, R.A.Lerner, J.C.Paulson, I.A.Wilson.
Ref. Nat Commun, 2018, 9, 1264.
PubMed id 29593268
Abstract
The hemagglutinin (HA) receptor-binding site (RBS) in human influenza A viruses is critical for attachment to host cells, which imposes a functional constraint on its natural evolution. On the other hand, being part of the major antigenic sites, the HA RBS of human H3N2 viruses needs to constantly mutate to evade the immune system. From large-scale mutagenesis experiments, we here show that several of the natural RBS substitutions become integrated into an extensive epistatic network that prevents substitution reversion. X-ray structural analysis reveals the mechanistic consequences as well as changes in the mode of receptor binding. Further studies are necessary to elucidate whether such entrenchment limits future options for immune escape or adversely affect long-term viral fitness.
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 Headers

 

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