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PDBsum entry 6bjh

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Top Page protein dna_rna Protein-protein interface(s) pores links
Pore analysis for: 6bjh calculated with MOLE 2.0 PDB id
6bjh
Pores calculated on whole structure Pores calculated excluding ligands

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2 pores, coloured by radius 2 pores, coloured by radius 2 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.52 3.52 33.1 -0.96 -0.64 10.2 72 0 0 0 0 0 0 0  A 8 C U 9 C U 10 C C 11 C C 12 C G 13 C C 14 C G
15 C G 19 C C 1 D G 2 D U 3 D A 4 D C 5 D G 6 D
2 3.52 3.52 42.7 -0.83 -0.67 8.7 72 0 0 0 0 0 0 0  A 5 C G 6 C U 7 C U 9 C U 10 C C 11 C C 12 C G 13
C C 14 C G 15 C C 1 D G 2 D U 3 D A 4 D C 5 D G 6
D C 7 D G 8 D G 9 D A 10 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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