PDBsum entry 6bfe

Tunnel analysis for: 6bfe calculated with

MOLE 2.0

PDB id

6bfe

Tunnels calculated on whole structure

Tunnels calculated excluding ligands

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MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

4 tunnels, coloured by tunnel radius

5 tunnels, coloured by tunnel radius

5 tunnels, coloured as in
list below

Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.

Tunnels

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.44

1.44

24.3

-1.33

-0.54

17.3

85

2

1

2

2

0

1

0

2

1.39

1.44

31.4

-0.47

-0.29

9.1

69

0

3

1

1

3

1

0

GOL 403 A

3

1.40

1.47

31.8

-0.58

-0.30

7.9

69

1

3

1

1

3

1

0

GOL 403 A

4

1.40

1.40

35.1

-0.59

-0.49

11.8

83

3

2

2

4

1

1

0

5

1.38

1.44

40.5

-0.57

-0.32

11.6

69

2

2

0

1

3

1

0

GOL 403 A

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Tunnels were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.