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PDBsum entry 6bf6

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 6bf6 calculated with MOLE 2.0 PDB id
6bf6
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.36 30.8 -0.10 -0.28 10.8 70 2 2 1 3 4 1 0  
2 2.23 2.66 60.6 -1.93 -0.26 20.2 85 10 1 8 4 3 0 0  
3 1.79 1.94 65.6 -2.29 -0.36 26.1 82 13 5 7 2 4 0 0  
4 1.36 1.50 71.0 -0.55 -0.08 16.6 79 9 4 4 6 5 0 0  
5 1.38 1.52 75.1 -1.19 -0.11 15.5 78 10 2 6 8 7 0 0  
6 1.40 1.46 85.0 -1.42 -0.17 21.2 80 13 4 8 6 6 0 0  
7 1.24 1.42 87.8 -0.45 0.05 15.3 76 7 3 5 12 5 2 0  
8 1.24 1.43 92.9 -0.80 -0.09 15.8 77 8 3 6 12 5 1 0  
9 1.12 1.42 100.7 -0.50 -0.03 13.5 83 9 3 9 18 3 3 0  
10 1.30 1.30 102.7 -0.88 -0.09 15.3 84 11 4 8 15 4 2 0  
11 1.32 1.32 208.8 -1.27 -0.15 17.2 82 21 8 17 20 11 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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