 |
PDBsum entry 6baa
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 6baa calculated with MOLE 2.0
|
PDB id
|
|
|
|
6baa
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
27 pores,
coloured by radius |
 |
22 pores,
coloured by radius
|
22 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.86 |
3.04 |
34.7 |
-1.30 |
-0.40 |
21.6 |
89 |
 |
4 |
1 |
2 |
5 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
2.38 |
2.54 |
44.3 |
-1.33 |
-0.26 |
23.4 |
84 |
6 |
1 |
0 |
5 |
2 |
0 |
0 |
|
 |
3 |
 |
1.30 |
1.43 |
53.0 |
1.85 |
0.67 |
3.3 |
70 |
2 |
0 |
1 |
12 |
5 |
0 |
1 |
|
 |
4 |
 |
1.29 |
1.43 |
60.3 |
1.71 |
0.80 |
7.6 |
75 |
3 |
1 |
1 |
14 |
5 |
1 |
0 |
|
 |
5 |
 |
1.28 |
1.64 |
69.9 |
1.94 |
0.75 |
6.6 |
75 |
4 |
1 |
1 |
15 |
4 |
1 |
0 |
|
 |
6 |
 |
2.65 |
2.79 |
78.7 |
-1.89 |
-0.48 |
26.2 |
83 |
11 |
4 |
3 |
6 |
1 |
1 |
0 |
ATP 401 D
|
 |
7 |
 |
1.56 |
2.73 |
79.2 |
-1.15 |
-0.16 |
21.0 |
83 |
9 |
2 |
1 |
9 |
2 |
1 |
0 |
|
 |
8 |
 |
1.12 |
1.08 |
79.5 |
0.74 |
0.70 |
12.1 |
69 |
5 |
2 |
0 |
12 |
8 |
0 |
1 |
|
 |
9 |
 |
1.36 |
1.55 |
80.1 |
1.54 |
0.71 |
6.6 |
74 |
5 |
1 |
2 |
16 |
6 |
1 |
1 |
|
 |
10 |
 |
1.92 |
2.09 |
127.0 |
0.79 |
0.40 |
8.5 |
78 |
7 |
5 |
9 |
29 |
10 |
1 |
2 |
|
 |
11 |
 |
2.38 |
2.54 |
126.3 |
-1.94 |
-0.39 |
26.2 |
83 |
17 |
4 |
6 |
6 |
3 |
1 |
0 |
ATP 401 A
|
 |
12 |
 |
1.89 |
2.07 |
129.5 |
1.24 |
0.72 |
6.2 |
69 |
4 |
2 |
3 |
19 |
12 |
0 |
2 |
|
 |
13 |
 |
1.87 |
2.05 |
131.3 |
1.01 |
0.53 |
6.7 |
73 |
3 |
2 |
6 |
18 |
9 |
0 |
1 |
|
 |
14 |
 |
1.87 |
2.05 |
131.4 |
0.97 |
0.52 |
6.8 |
73 |
3 |
2 |
6 |
18 |
9 |
0 |
1 |
|
 |
15 |
 |
1.73 |
1.91 |
133.9 |
1.34 |
0.60 |
4.2 |
67 |
2 |
2 |
3 |
22 |
15 |
0 |
2 |
|
 |
16 |
 |
1.52 |
2.73 |
141.2 |
-1.81 |
-0.33 |
26.0 |
82 |
17 |
5 |
5 |
10 |
3 |
2 |
0 |
ATP 401 A
|
 |
17 |
 |
1.95 |
2.18 |
147.6 |
0.97 |
0.45 |
6.0 |
71 |
3 |
2 |
5 |
22 |
13 |
0 |
1 |
|
 |
18 |
 |
1.42 |
1.43 |
190.4 |
0.49 |
0.17 |
9.9 |
85 |
13 |
12 |
17 |
37 |
8 |
3 |
2 |
|
 |
19 |
 |
1.19 |
1.54 |
190.5 |
-0.19 |
0.11 |
12.0 |
74 |
12 |
3 |
6 |
22 |
8 |
6 |
1 |
|
 |
20 |
 |
1.57 |
1.57 |
193.4 |
0.64 |
0.29 |
8.8 |
82 |
12 |
11 |
16 |
41 |
13 |
3 |
2 |
|
 |
21 |
 |
1.32 |
1.35 |
249.9 |
-0.43 |
-0.13 |
15.2 |
86 |
18 |
18 |
20 |
27 |
6 |
4 |
1 |
ATP 401 C
|
 |
22 |
 |
1.57 |
1.60 |
253.4 |
-0.40 |
-0.09 |
15.0 |
86 |
20 |
17 |
20 |
27 |
6 |
4 |
1 |
ATP 401 A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |