spacer
spacer

PDBsum entry 6b1h

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6b1h calculated with MOLE 2.0 PDB id
6b1h
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
2 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.45 18.4 -0.30 -0.03 12.6 83 2 1 2 3 1 1 0  SO4 302 A CL 305 B
2 1.25 1.45 18.8 0.53 0.32 12.5 84 2 1 1 4 1 0 0  SO4 302 A
3 1.26 1.46 20.7 -0.77 -0.16 17.0 81 2 1 1 3 2 1 0  SO4 302 A
4 1.04 1.04 18.9 -0.48 -0.44 9.0 69 2 2 0 3 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer