PDBsum entry 6amc Go to PDB code:  Tunnel analysis for: 6amc calculated with MOLE 2.0 PDB id 6amc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.37 1.34 43.1 -1.29 -0.20 19.4 86 6 7 4 7 1 1 0   2 1.25 1.87 45.8 -1.72 -0.44 17.7 83 6 2 4 3 2 0 0  LLP 82 A 3 1.39 1.37 52.7 -1.85 -0.38 22.8 80 8 8 3 5 2 1 0   4 1.65 1.65 22.9 -1.84 0.20 14.6 73 3 1 1 1 4 0 0   5 1.30 2.68 15.6 1.17 0.68 7.2 75 0 1 1 4 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.