PDBsum entry 6af3 Go to PDB code:  Pore analysis for: 6af3 calculated with MOLE 2.0 PDB id 6af3 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.16 4.17 25.3 -2.31 -0.46 31.2 80 4 4 1 2 1 0 0  MSE 91 E 2 1.16 1.16 25.4 -1.51 -0.42 22.8 80 4 1 2 3 0 1 0  MSE 28 D 3 1.45 1.46 55.3 -1.26 -0.33 18.5 84 7 2 2 7 0 1 0  MSE 28 D MSE 64 D 4 1.32 2.62 59.3 -1.20 -0.31 14.1 79 2 3 4 4 2 1 0   5 1.39 2.10 90.7 -2.26 -0.50 30.6 81 9 7 3 3 3 1 0  MSE 91 E 6 1.33 2.50 90.8 -1.87 -0.39 24.4 81 8 6 2 4 1 2 0   7 1.49 1.79 111.9 -1.57 -0.62 20.8 85 10 6 5 6 0 0 0  MSE 28 B 8 1.19 2.62 137.7 -1.62 -0.44 20.1 84 11 4 7 7 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.