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PDBsum entry 6a8c

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6a8c calculated with MOLE 2.0 PDB id
6a8c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.43 2.53 19.9 -0.88 -0.36 8.8 89 1 1 2 4 1 0 1  ADP 411 A
2 1.38 1.57 15.4 -0.38 -0.06 10.6 72 1 0 0 4 1 1 0  
3 1.24 2.27 15.5 -0.36 -0.08 9.2 72 2 0 0 4 1 1 0  
4 1.24 2.36 16.0 -0.36 -0.02 10.6 72 1 0 0 4 1 1 0  
5 1.38 1.58 18.2 -1.33 0.08 16.7 77 3 0 0 3 1 1 0  
6 1.24 2.38 18.7 -1.42 0.06 16.8 77 3 0 0 3 1 1 0  
7 1.74 2.31 15.3 -1.56 -0.31 19.2 86 2 2 0 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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