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PDBsum entry 6a3b

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 6a3b calculated with MOLE 2.0 PDB id
6a3b
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.41 1.64 21.8 -1.26 -0.30 23.4 82 5 2 0 4 0 0 0  
2 1.32 3.52 26.3 -1.86 -0.63 15.1 78 3 3 4 3 2 1 0  
3 1.41 1.61 26.9 -1.74 -0.58 10.5 82 3 2 6 2 1 1 0  
4 1.19 1.27 32.8 -2.31 -0.58 25.5 80 5 4 2 2 1 0 0  
5 1.41 1.59 38.4 -1.68 -0.65 9.5 83 4 4 7 3 1 1 0  
6 1.39 1.58 21.9 0.29 0.15 14.0 74 2 1 2 3 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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