PDBsum entry 5zoj Go to PDB code:  Tunnel analysis for: 5zoj calculated with MOLE 2.0 PDB id 5zoj Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.21 1.24 24.8 -0.45 -0.03 13.2 70 2 2 0 4 4 0 0   2 1.21 1.24 29.4 -1.51 -0.14 23.6 79 4 2 0 4 2 0 0   3 1.17 2.61 29.0 -0.37 0.16 13.8 74 4 3 3 4 2 0 2   4 1.18 2.60 32.5 -0.03 0.24 9.5 73 2 2 4 5 4 0 2   5 1.60 1.70 16.7 -0.30 0.22 2.2 61 0 0 1 2 3 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.