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PDBsum entry 5zjs

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Top Page protein dna_rna Protein-protein interface(s) pores links
Pore analysis for: 5zjs calculated with MOLE 2.0 PDB id
5zjs
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 1 pore, coloured by radius 1 pore, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.17 49.1 -1.46 -0.16 15.3 90 4 0 4 3 0 0 0  DC 3 C DA 4 C DT 5 C DT 6 C DA 7 C DA 8 C DT 9 C
DC 2 D DA 3 D DT 4 D DT 7 D DT 8 D DT 11 D DG 12
D DA 13 D DC 14 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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