PDBsum entry 5zbh Go to PDB code:  Tunnel analysis for: 5zbh calculated with MOLE 2.0 PDB id 5zbh Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.05 2.18 24.1 -0.18 0.04 6.9 73 0 1 2 2 5 0 0  9AF 1201 A 2 2.05 2.20 24.6 -0.42 0.01 10.5 74 1 2 3 1 5 0 0  9AF 1201 A 3 1.54 3.43 24.9 -0.30 -0.06 7.6 80 1 1 3 2 4 0 0  9AF 1201 A 4 1.55 3.44 25.4 -0.48 -0.06 10.1 79 2 2 4 1 4 0 0  9AF 1201 A 5 2.06 2.20 30.3 -0.69 -0.17 9.4 75 0 2 3 1 5 0 1  9AF 1201 A 6 1.59 3.46 31.1 -0.71 -0.22 9.1 80 1 2 4 1 4 0 1  9AF 1201 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.