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PDBsum entry 5yf9
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Pore analysis for: 5yf9 calculated with  MOLE 2.0
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PDB id
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5yf9
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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3 pores,
coloured by radius |
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4 pores,
coloured by radius
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4 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.85 |
2.59 |
53.6 |
-2.67 |
-0.51 |
27.2 |
78 |
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8 |
7 |
5 |
2 |
2 |
1 |
0 |
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SO4 402 B SO4 402 X
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2 |
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1.86 |
2.48 |
54.0 |
-2.75 |
-0.51 |
27.7 |
76 |
7 |
8 |
5 |
2 |
3 |
1 |
0 |
SO4 402 B SO4 402 X
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3 |
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2.53 |
2.59 |
57.0 |
-3.11 |
-0.20 |
30.0 |
80 |
13 |
5 |
5 |
0 |
4 |
2 |
0 |
SO4 404 B SO4 406 X
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4 |
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2.11 |
2.18 |
57.4 |
-2.20 |
-0.46 |
26.1 |
79 |
9 |
9 |
5 |
4 |
2 |
1 |
0 |
SO4 402 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program