spacer
spacer

PDBsum entry 5xcc

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 5xcc calculated with MOLE 2.0 PDB id
5xcc
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.62 1.65 125.7 -1.86 -0.67 21.4 86 7 8 6 5 0 0 0  
2 1.64 1.64 245.8 -1.75 -0.60 19.8 86 14 13 17 10 3 0 0  
3 1.43 1.64 40.0 -0.92 -0.42 12.7 88 5 0 2 6 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer