PDBsum entry 5w1v Go to PDB code:  Pore analysis for: 5w1v calculated with MOLE 2.0 PDB id 5w1v Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   19 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.54 33.6 -1.41 -0.47 19.0 81 1 3 3 2 1 1 0   2 2.87 3.11 42.4 -1.96 -0.55 24.7 85 6 5 6 4 0 0 0   3 2.69 4.52 46.0 -1.45 -0.56 16.2 82 3 4 5 4 1 1 0   4 1.65 2.92 47.9 -1.94 -0.23 21.6 74 3 3 3 1 4 1 0   5 2.27 2.48 64.9 -2.05 -0.62 27.6 86 10 9 4 3 0 1 0   6 2.21 2.25 76.3 -1.72 -0.61 21.8 87 7 8 5 4 0 2 0   7 2.62 4.09 84.8 -1.28 -0.47 11.9 80 4 5 10 3 3 1 0   8 1.35 2.48 95.3 -0.92 -0.42 7.8 81 4 4 10 5 3 3 0   9 1.28 1.49 96.5 -0.98 -0.35 16.2 82 7 7 5 6 5 3 0   10 2.23 4.28 102.0 -2.08 -0.48 25.3 81 8 9 4 1 3 3 0   11 2.25 2.32 108.4 -1.78 -0.52 23.1 89 8 12 10 6 1 3 0   12 1.30 1.44 117.5 -1.62 -0.45 24.0 82 9 10 6 5 1 2 0   13 1.89 1.87 124.7 -1.80 -0.46 22.8 80 9 12 10 6 5 5 0   14 1.66 1.65 142.1 -1.53 -0.54 18.2 85 5 7 10 6 2 2 1   15 1.11 4.32 142.5 -2.42 -0.46 25.5 78 8 8 10 2 4 0 0   16 1.34 1.42 193.4 -2.20 -0.63 18.2 88 11 9 19 7 0 2 0   17 1.41 1.65 221.2 -1.28 -0.34 17.1 80 7 9 18 13 5 2 0   18 1.23 1.41 31.5 0.17 -0.09 6.3 85 2 1 1 5 2 0 0   19 1.90 3.76 50.2 -2.02 -0.19 19.9 76 4 5 3 1 5 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.