PDBsum entry 5vrf Go to PDB code:  Pore analysis for: 5vrf calculated with MOLE 2.0 PDB id 5vrf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 1.38 48.0 1.00 0.15 6.8 83 3 2 2 15 1 0 0   2 1.20 1.39 49.6 -0.30 -0.15 16.7 89 5 5 0 7 1 1 0   3 2.58 3.71 63.8 -1.20 -0.18 18.1 89 4 3 5 5 2 0 0   4 1.21 1.41 66.7 0.14 -0.04 11.5 84 5 4 0 12 4 1 0   5 1.21 2.43 86.4 -0.12 -0.02 17.1 90 6 7 3 13 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.