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PDBsum entry 5vev

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 5vev calculated with MOLE 2.0 PDB id
5vev
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.19 2.19 60.3 -1.21 -0.39 17.2 70 6 5 1 3 3 5 0  EDO 505 A EDO 506 A EDO 503 B
2 2.05 2.23 123.4 -1.07 -0.29 19.3 77 7 7 3 9 3 5 0  EDO 505 A EDO 503 B
3 2.20 2.43 126.1 -1.38 -0.40 18.5 77 5 7 3 7 2 8 0  EDO 506 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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